Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 AC116050.2-201ENST00000612102 1779 ntBASIC12.39□□□□□ -0.43
PCP4P48539 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
PCP4P48539 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCP4P48539 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCP4P48539 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 AC023024.2-201ENST00000623561 1993 ntBASIC12.39□□□□□ -0.43
PCP4P48539 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 SPOCK3-207ENST00000504953 2900 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
PCP4P48539 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
PCP4P48539 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
PCP4P48539 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC12.39□□□□□ -0.43
PCP4P48539 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCP4P48539 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 CICP11-201ENST00000434745 2827 ntBASIC12.38□□□□□ -0.43
PCP4P48539 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 MYO15B-237ENST00000642007 4893 ntBASIC12.38□□□□□ -0.43
PCP4P48539 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PCP4P48539 AC004687.1-201ENST00000579003 1625 ntBASIC12.38□□□□□ -0.43
PCP4P48539 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.38□□□□□ -0.43
PCP4P48539 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
PCP4P48539 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.38□□□□□ -0.43
PCP4P48539 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.38□□□□□ -0.43
PCP4P48539 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCP4P48539 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCP4P48539 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 CICP16-201ENST00000502609 2813 ntBASIC12.37□□□□□ -0.43
PCP4P48539 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.37□□□□□ -0.43
PCP4P48539 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.37□□□□□ -0.43
PCP4P48539 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCP4P48539 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms