Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 LINC00896-202ENST00000609602 2128 ntBASIC17.44■□□□□ 0.38
SLC6A12P48065 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC6A12P48065 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SLC6A12P48065 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A12P48065 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 AP003733.1-201ENST00000491725 852 ntBASIC17.43■□□□□ 0.38
SLC6A12P48065 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC6A12P48065 ZNF444P1-201ENST00000559497 298 ntBASIC17.43■□□□□ 0.38
SLC6A12P48065 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC6A12P48065 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC6A12P48065 AC083849.1-201ENST00000615227 514 ntBASIC17.43■□□□□ 0.38
SLC6A12P48065 LINC01311-201ENST00000565162 1445 ntBASIC17.43■□□□□ 0.38
SLC6A12P48065 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SLC6A12P48065 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC6A12P48065 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC6A12P48065 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC6A12P48065 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC6A12P48065 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A12P48065 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A12P48065 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A12P48065 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A12P48065 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC6A12P48065 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A12P48065 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 TMPOP1-202ENST00000424642 1267 ntBASIC17.42■□□□□ 0.38
SLC6A12P48065 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A12P48065 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC6A12P48065 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.42■□□□□ 0.38
SLC6A12P48065 AC009154.2-201ENST00000621177 724 ntBASIC17.42■□□□□ 0.38
SLC6A12P48065 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A12P48065 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SLC6A12P48065 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC6A12P48065 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SLC6A12P48065 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
SLC6A12P48065 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC6A12P48065 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC6A12P48065 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A12P48065 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A12P48065 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.41■□□□□ 0.38
SLC6A12P48065 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC6A12P48065 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC6A12P48065 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC6A12P48065 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SLC6A12P48065 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC6A12P48065 KRT8P47-201ENST00000604727 1398 ntBASIC17.4■□□□□ 0.38
SLC6A12P48065 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SLC6A12P48065 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC6A12P48065 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC6A12P48065 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms