Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.171e-6■■■□□ 15.2
MATR3P43243 XIST-207ENST00000445814 437 ntTSL 35.46□□□□□ -1.544e-20■■■□□ 15.2
MATR3P43243 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.896e-8■■■□□ 15.2
MATR3P43243 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.052e-11■■■□□ 15.2
MATR3P43243 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.092e-11■■■□□ 15.2
MATR3P43243 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.122e-11■■■□□ 15.2
MATR3P43243 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.222e-11■■■□□ 15.2
MATR3P43243 TNRC6C-202ENST00000335749 9740 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.322e-11■■■□□ 15.2
MATR3P43243 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.12e-7■■■□□ 15.2
MATR3P43243 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.652e-7■■■□□ 15.2
MATR3P43243 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.377e-7■■■□□ 15.2
MATR3P43243 EXT1-203ENST00000437196 1446 ntTSL 514.75□□□□□ -0.057e-7■■■□□ 15.2
MATR3P43243 EXT1-202ENST00000436216 700 ntTSL 313.51□□□□□ -0.257e-7■■■□□ 15.2
MATR3P43243 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.943e-6■■■□□ 15.2
MATR3P43243 RFFL-211ENST00000584541 563 ntTSL 420.06■□□□□ 0.83e-6■■■□□ 15.2
MATR3P43243 AC004223.3-202ENST00000591723 676 ntTSL 518.22■□□□□ 0.513e-6■■■□□ 15.2
MATR3P43243 AC004223.3-203ENST00000592181 787 ntAPPRIS ALT2 TSL 516.7■□□□□ 0.263e-6■■■□□ 15.2
MATR3P43243 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.243e-6■■■□□ 15.2
MATR3P43243 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.163e-6■■■□□ 15.2
MATR3P43243 RFFL-204ENST00000414419 559 ntTSL 412.3□□□□□ -0.443e-6■■■□□ 15.2
MATR3P43243 RFFL-209ENST00000581265 596 ntTSL 411.52□□□□□ -0.573e-6■■■□□ 15.2
MATR3P43243 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC11.51□□□□□ -0.573e-6■■■□□ 15.2
MATR3P43243 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.393e-6■■■□□ 15.2
MATR3P43243 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.71□□□□□ -0.861e-7■■■□□ 15.2
MATR3P43243 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.99□□□□□ -1.291e-7■■■□□ 15.2
MATR3P43243 NPSR1-AS1-203ENST00000428922 510 ntTSL 1 (best)4.89□□□□□ -1.632e-6■■■□□ 15.2
MATR3P43243 RABGEF1-211ENST00000503687 4139 ntTSL 214.55□□□□□ -0.081e-14■■■□□ 15.2
MATR3P43243 RABGEF1-209ENST00000607882 2654 ntTSL 213.66□□□□□ -0.221e-14■■■□□ 15.2
MATR3P43243 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.16□□□□□ -1.264e-7■■■□□ 15.2
MATR3P43243 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.484e-7■■■□□ 15.2
MATR3P43243 VWDE-202ENST00000326715 1394 ntTSL 515.81■□□□□ 0.124e-7■■■□□ 15.2
MATR3P43243 VWDE-203ENST00000452576 5936 ntTSL 1 (best)14.48□□□□□ -0.094e-7■■■□□ 15.2
MATR3P43243 VWDE-201ENST00000275358 5260 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.154e-7■■■□□ 15.2
MATR3P43243 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC12.9□□□□□ -0.344e-7■■■□□ 15.2
MATR3P43243 VWDE-205ENST00000521169 4700 ntTSL 512.9□□□□□ -0.344e-7■■■□□ 15.2
MATR3P43243 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.343e-7■■■□□ 15.2
MATR3P43243 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.42e-6■■■□□ 15.2
MATR3P43243 APTX-223ENST00000479656 1881 ntTSL 1 (best)12.24□□□□□ -0.453e-7■■■□□ 15.2
MATR3P43243 SETD5-211ENST00000443339 3478 ntTSL 211.62□□□□□ -0.552e-6■■■□□ 15.2
MATR3P43243 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.892e-6■■■□□ 15.2
MATR3P43243 CPED1-210ENST00000521774 264 ntTSL 29.86□□□□□ -0.833e-6■■■□□ 15.1
MATR3P43243 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC14.1□□□□□ -0.155e-6■■■□□ 15.1
MATR3P43243 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.627e-12■■■□□ 15.1
MATR3P43243 TPP1-215ENST00000533371 3536 ntTSL 1 (best) BASIC10.97□□□□□ -0.657e-12■■■□□ 15.1
MATR3P43243 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.022e-7■■■□□ 15.1
MATR3P43243 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.73■□□□□ 0.752e-7■■■□□ 15.1
MATR3P43243 ABCD3-205ENST00000484213 4367 ntTSL 1 (best)4.91□□□□□ -1.623e-6■■■□□ 15.1
MATR3P43243 PTP4A1-202ENST00000470661 479 ntTSL 27.27□□□□□ -1.254e-9■■■□□ 15.1
MATR3P43243 EPB41L2-212ENST00000526333 549 ntTSL 56.9□□□□□ -1.31e-6■■■□□ 15.1
MATR3P43243 EPB41L2-219ENST00000528179 560 ntTSL 56.5□□□□□ -1.371e-6■■■□□ 15.1
MATR3P43243 SLC25A13-203ENST00000472162 568 ntTSL 417.47■□□□□ 0.391e-9■■■□□ 15.1
MATR3P43243 TLK1-211ENST00000486857 715 ntTSL 34.78□□□□□ -1.641e-6■■■□□ 15.1
MATR3P43243 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.42e-6■■■□□ 15.1
MATR3P43243 DECR2-216ENST00000633348 762 ntTSL 322.74■■□□□ 1.232e-6■■■□□ 15.1
MATR3P43243 DECR2-217ENST00000633923 509 ntTSL 321.22■□□□□ 0.992e-6■■■□□ 15.1
MATR3P43243 DECR2-206ENST00000445291 1078 ntTSL 520.85■□□□□ 0.932e-6■■■□□ 15.1
MATR3P43243 DECR2-205ENST00000439661 1618 ntTSL 220.57■□□□□ 0.882e-6■■■□□ 15.1
MATR3P43243 DECR2-204ENST00000437024 1738 ntTSL 220.54■□□□□ 0.882e-6■■■□□ 15.1
MATR3P43243 NME4-205ENST00000444498 1111 ntTSL 320.47■□□□□ 0.872e-6■■■□□ 15.1
MATR3P43243 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.59■□□□□ 0.732e-6■■■□□ 15.1
MATR3P43243 DECR2-203ENST00000429116 721 ntTSL 318.36■□□□□ 0.532e-6■■■□□ 15.1
MATR3P43243 DECR2-210ENST00000465166 702 ntTSL 217.95■□□□□ 0.462e-6■■■□□ 15.1
MATR3P43243 DECR2-209ENST00000461947 1017 ntTSL 517.1■□□□□ 0.332e-6■■■□□ 15.1
MATR3P43243 ST3GAL6-206ENST00000466482 540 ntTSL 424.66■■□□□ 1.542e-6■■■□□ 15
MATR3P43243 ST3GAL6-203ENST00000460774 582 ntTSL 321.34■■□□□ 1.012e-6■■■□□ 15
MATR3P43243 ST3GAL6-227ENST00000497621 2109 ntTSL 1 (best)21.3■■□□□ 12e-6■■■□□ 15
MATR3P43243 ST3GAL6-204ENST00000462152 1102 ntTSL 220.91■□□□□ 0.942e-6■■■□□ 15
MATR3P43243 ST3GAL6-226ENST00000497008 564 ntTSL 420.89■□□□□ 0.932e-6■■■□□ 15
MATR3P43243 ST3GAL6-213ENST00000480133 360 ntTSL 419.63■□□□□ 0.732e-6■■■□□ 15
MATR3P43243 ST3GAL6-219ENST00000489112 804 ntTSL 319.45■□□□□ 0.72e-6■■■□□ 15
MATR3P43243 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.572e-6■■■□□ 15
MATR3P43243 ST3GAL6-202ENST00000394162 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.132e-6■■■□□ 15
MATR3P43243 ST3GAL6-208ENST00000469105 2837 ntTSL 1 (best)14.13□□□□□ -0.152e-6■■■□□ 15
MATR3P43243 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC13.98□□□□□ -0.172e-6■■■□□ 15
MATR3P43243 ST3GAL6-217ENST00000486249 3148 ntTSL 213.44□□□□□ -0.262e-6■■■□□ 15
MATR3P43243 ST3GAL6-201ENST00000265261 3362 ntTSL 2 BASIC11.7□□□□□ -0.542e-6■■■□□ 15
MATR3P43243 ST3GAL6-218ENST00000486334 750 ntTSL 54.42□□□□□ -1.72e-6■■■□□ 15
MATR3P43243 ST3GAL6-205ENST00000465004 314 ntTSL 24.39□□□□□ -1.712e-6■■■□□ 15
MATR3P43243 CHN2-204ENST00000409922 740 ntTSL 210.02□□□□□ -0.814e-10■■■□□ 15
MATR3P43243 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.33■■□□□ 1.011e-6■■■□□ 15
MATR3P43243 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.2■□□□□ 0.51e-6■■■□□ 15
MATR3P43243 PMF1-206ENST00000606952 1275 ntTSL 1 (best)17.93■□□□□ 0.461e-6■■■□□ 15
MATR3P43243 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.461e-6■■■□□ 15
MATR3P43243 PMF1-205ENST00000497069 837 ntTSL 317.38■□□□□ 0.371e-6■■■□□ 15
MATR3P43243 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-6■■■□□ 15
MATR3P43243 PMF1-201ENST00000368273 884 ntTSL 2 BASIC14.27□□□□□ -0.131e-6■■■□□ 15
MATR3P43243 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC13.75□□□□□ -0.211e-6■■■□□ 15
MATR3P43243 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC13.37□□□□□ -0.271e-6■■■□□ 15
MATR3P43243 PMF1-204ENST00000466489 933 ntTSL 1 (best)10.85□□□□□ -0.671e-6■■■□□ 15
MATR3P43243 STAT2-207ENST00000556539 3278 ntTSL 1 (best)13.84□□□□□ -0.192e-6■■■□□ 15
MATR3P43243 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.342e-6■■■□□ 15
MATR3P43243 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.54■■■□□ 27e-7■■■□□ 15
MATR3P43243 PROC-208ENST00000442644 600 ntTSL 321.55■■□□□ 1.047e-7■■■□□ 15
MATR3P43243 PROC-202ENST00000402125 779 ntTSL 220.11■□□□□ 0.817e-7■■■□□ 15
MATR3P43243 PROC-209ENST00000464089 563 ntTSL 419.14■□□□□ 0.657e-7■■■□□ 15
MATR3P43243 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.587e-7■■■□□ 15
MATR3P43243 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.346e-7■■■□□ 15
MATR3P43243 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.5■■□□□ 1.036e-7■■■□□ 15
MATR3P43243 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.316e-7■■■□□ 15
MATR3P43243 USP36-214ENST00000589225 5885 ntTSL 1 (best)16.82■□□□□ 0.286e-7■■■□□ 15
Retrieved 100 of 16,209 protein–RNA pairs in 81.4 ms