Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT20P35900 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT20P35900 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KRT20P35900 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 AC134043.2-201ENST00000624206 2238 ntBASIC17.19■□□□□ 0.34
KRT20P35900 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 AC113347.1-201ENST00000413321 391 ntBASIC17.19■□□□□ 0.34
KRT20P35900 ECEL1P3-201ENST00000427961 737 ntBASIC17.19■□□□□ 0.34
KRT20P35900 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
KRT20P35900 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.19■□□□□ 0.34
KRT20P35900 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT20P35900 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT20P35900 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KRT20P35900 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
KRT20P35900 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT20P35900 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
KRT20P35900 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT20P35900 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT20P35900 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 AC099398.1-201ENST00000567919 2776 ntBASIC17.18■□□□□ 0.34
KRT20P35900 GNAS-203ENST00000306120 1878 ntBASIC17.18■□□□□ 0.34
KRT20P35900 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.18■□□□□ 0.34
KRT20P35900 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 KRT18P23-201ENST00000435622 1283 ntBASIC17.18■□□□□ 0.34
KRT20P35900 AC009947.2-201ENST00000444014 672 ntBASIC17.18■□□□□ 0.34
KRT20P35900 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 AC012306.2-201ENST00000609350 630 ntBASIC17.18■□□□□ 0.34
KRT20P35900 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
KRT20P35900 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 KRT8P7-201ENST00000533003 1432 ntBASIC17.18■□□□□ 0.34
KRT20P35900 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
KRT20P35900 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
KRT20P35900 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.18■□□□□ 0.34
KRT20P35900 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.17■□□□□ 0.34
KRT20P35900 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
KRT20P35900 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KRT20P35900 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms