Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.36■□□□□ 0.21
GDF1P27539 AL845331.1-201ENST00000424978 1190 ntBASIC16.36■□□□□ 0.21
GDF1P27539 AC068472.1-201ENST00000474589 881 ntBASIC16.36■□□□□ 0.21
GDF1P27539 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.36■□□□□ 0.21
GDF1P27539 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.36■□□□□ 0.21
GDF1P27539 AP005901.3-202ENST00000581653 237 ntBASIC16.36■□□□□ 0.21
GDF1P27539 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.36■□□□□ 0.21
GDF1P27539 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.36■□□□□ 0.21
GDF1P27539 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
GDF1P27539 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
GDF1P27539 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
GDF1P27539 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.35■□□□□ 0.21
GDF1P27539 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.35■□□□□ 0.21
GDF1P27539 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
GDF1P27539 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.35■□□□□ 0.21
GDF1P27539 NUS1P2-201ENST00000417358 873 ntBASIC16.35■□□□□ 0.21
GDF1P27539 IGHV3-47-201ENST00000425060 335 ntBASIC16.35■□□□□ 0.21
GDF1P27539 TPM4P1-201ENST00000436100 807 ntBASIC16.35■□□□□ 0.21
GDF1P27539 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.35■□□□□ 0.21
GDF1P27539 MTCL1P1-201ENST00000446207 792 ntBASIC16.35■□□□□ 0.21
GDF1P27539 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.35■□□□□ 0.21
GDF1P27539 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.35■□□□□ 0.21
GDF1P27539 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.35■□□□□ 0.21
GDF1P27539 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 AC091304.2-201ENST00000564639 760 ntBASIC16.35■□□□□ 0.21
GDF1P27539 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.35■□□□□ 0.21
GDF1P27539 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 AL121894.2-201ENST00000602977 491 ntBASIC16.35■□□□□ 0.21
GDF1P27539 AL732292.2-201ENST00000609649 430 ntBASIC16.35■□□□□ 0.21
GDF1P27539 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.35■□□□□ 0.21
GDF1P27539 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
GDF1P27539 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
GDF1P27539 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 PHGDH-209ENST00000641074 1780 ntBASIC16.34■□□□□ 0.21
GDF1P27539 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
GDF1P27539 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.34■□□□□ 0.21
GDF1P27539 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
GDF1P27539 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.34■□□□□ 0.21
GDF1P27539 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.34■□□□□ 0.21
GDF1P27539 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.34■□□□□ 0.21
GDF1P27539 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
GDF1P27539 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms