Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.01■□□□□ 0.63
MMP8P22894 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MMP8P22894 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MMP8P22894 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.01■□□□□ 0.63
MMP8P22894 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19■□□□□ 0.63
MMP8P22894 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19■□□□□ 0.63
MMP8P22894 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MMP8P22894 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19■□□□□ 0.63
MMP8P22894 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 AP003733.1-201ENST00000491725 852 ntBASIC19■□□□□ 0.63
MMP8P22894 ZNF444P1-201ENST00000559497 298 ntBASIC19■□□□□ 0.63
MMP8P22894 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19■□□□□ 0.63
MMP8P22894 AC083849.1-201ENST00000615227 514 ntBASIC19■□□□□ 0.63
MMP8P22894 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19■□□□□ 0.63
MMP8P22894 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MMP8P22894 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19■□□□□ 0.63
MMP8P22894 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
MMP8P22894 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19■□□□□ 0.63
MMP8P22894 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 AC026471.1-201ENST00000564629 3026 ntBASIC19■□□□□ 0.63
MMP8P22894 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19■□□□□ 0.63
MMP8P22894 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MMP8P22894 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19■□□□□ 0.63
MMP8P22894 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MMP8P22894 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19■□□□□ 0.63
MMP8P22894 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.99■□□□□ 0.63
MMP8P22894 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.99■□□□□ 0.63
MMP8P22894 AC009154.2-201ENST00000621177 724 ntBASIC18.99■□□□□ 0.63
MMP8P22894 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.99■□□□□ 0.63
MMP8P22894 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MMP8P22894 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.99■□□□□ 0.63
MMP8P22894 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP8P22894 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MMP8P22894 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.98■□□□□ 0.63
MMP8P22894 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP8P22894 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MMP8P22894 LETM1P2-201ENST00000597330 2178 ntBASIC18.98■□□□□ 0.63
MMP8P22894 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP8P22894 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
MMP8P22894 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.98■□□□□ 0.63
MMP8P22894 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.98■□□□□ 0.63
MMP8P22894 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.98■□□□□ 0.63
MMP8P22894 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.98■□□□□ 0.63
MMP8P22894 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.98■□□□□ 0.63
MMP8P22894 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MMP8P22894 LINC00896-202ENST00000609602 2128 ntBASIC18.98■□□□□ 0.63
MMP8P22894 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 AL353692.3-201ENST00000407031 1396 ntBASIC18.97■□□□□ 0.63
MMP8P22894 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.97■□□□□ 0.63
MMP8P22894 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MMP8P22894 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.97■□□□□ 0.63
MMP8P22894 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms