Protein–RNA interactions for Protein: P16383

GCFC2, GC-rich sequence DNA-binding factor 2, humanhuman

Known RBP Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2P16383 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
GCFC2P16383 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.4■□□□□ 0.86
GCFC2P16383 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 UPK3BP1-201ENST00000428678 509 ntBASIC20.4■□□□□ 0.86
GCFC2P16383 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.4■□□□□ 0.86
GCFC2P16383 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.4■□□□□ 0.86
GCFC2P16383 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.4■□□□□ 0.86
GCFC2P16383 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
GCFC2P16383 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.4■□□□□ 0.86
GCFC2P16383 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.4■□□□□ 0.86
GCFC2P16383 AL353801.3-201ENST00000609898 542 ntBASIC20.4■□□□□ 0.86
GCFC2P16383 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.4■□□□□ 0.86
GCFC2P16383 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GCFC2P16383 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
GCFC2P16383 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
GCFC2P16383 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
GCFC2P16383 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.39■□□□□ 0.86
GCFC2P16383 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GCFC2P16383 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GCFC2P16383 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GCFC2P16383 ATP5G2P1-201ENST00000433580 426 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 AP002383.4-201ENST00000442518 975 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 AC112698.1-201ENST00000510299 916 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GCFC2P16383 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.39■□□□□ 0.85
GCFC2P16383 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.39■□□□□ 0.85
GCFC2P16383 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.39■□□□□ 0.85
GCFC2P16383 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 NPAP1P7-201ENST00000613027 823 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 AC124864.1-201ENST00000623408 392 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 AP000997.3-201ENST00000623333 2250 ntBASIC20.39■□□□□ 0.85
GCFC2P16383 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
GCFC2P16383 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GCFC2P16383 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GCFC2P16383 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.39■□□□□ 0.85
GCFC2P16383 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
GCFC2P16383 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.38■□□□□ 0.85
GCFC2P16383 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.38■□□□□ 0.85
GCFC2P16383 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
GCFC2P16383 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 SLC25A6P5-201ENST00000435663 894 ntBASIC20.38■□□□□ 0.85
GCFC2P16383 DRAXINP1-201ENST00000437611 948 ntBASIC20.38■□□□□ 0.85
GCFC2P16383 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.38■□□□□ 0.85
GCFC2P16383 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
GCFC2P16383 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GCFC2P16383 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GCFC2P16383 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.38■□□□□ 0.85
GCFC2P16383 KRT18P55-202ENST00000578578 1546 ntBASIC20.37■□□□□ 0.85
GCFC2P16383 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.37■□□□□ 0.85
GCFC2P16383 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.37■□□□□ 0.85
GCFC2P16383 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.37■□□□□ 0.85
GCFC2P16383 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.37■□□□□ 0.85
GCFC2P16383 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GCFC2P16383 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GCFC2P16383 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GCFC2P16383 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.37■□□□□ 0.85
GCFC2P16383 KRT18P1-202ENST00000452408 1331 ntBASIC20.37■□□□□ 0.85
GCFC2P16383 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GCFC2P16383 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GCFC2P16383 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.37■□□□□ 0.85
GCFC2P16383 AC246785.2-201ENST00000432512 513 ntBASIC20.37■□□□□ 0.85
GCFC2P16383 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.37■□□□□ 0.85
GCFC2P16383 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.37■□□□□ 0.85
GCFC2P16383 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms