Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 AC079776.2-201ENST00000641154 1609 ntBASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 DNAJB3-202ENST00000449667 1266 ntBASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 AC005593.1-201ENST00000624894 515 ntBASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC23.86■■□□□ 1.41
CSB-PGBD3P0DP91 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AC004817.3-201ENST00000602957 2129 ntBASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AC064836.3-201ENST00000607928 673 ntBASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CSB-PGBD3P0DP91 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 MTDHP5-201ENST00000598980 586 ntBASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 LINC02084-201ENST00000606069 1096 ntBASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 AC097374.2-201ENST00000618617 1306 ntBASIC23.84■■□□□ 1.41
CSB-PGBD3P0DP91 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 AC211486.1-202ENST00000416371 468 ntBASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 AC211476.1-201ENST00000503899 468 ntBASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 AC006557.2-201ENST00000592985 1240 ntBASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.83■■□□□ 1.41
CSB-PGBD3P0DP91 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CSB-PGBD3P0DP91 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CSB-PGBD3P0DP91 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms