Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN1P07384 UPK3BP1-201ENST00000428678 509 ntBASIC17.8■□□□□ 0.44
CAPN1P07384 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.8■□□□□ 0.44
CAPN1P07384 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN1P07384 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN1P07384 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN1P07384 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN1P07384 HYMAI.1-201ENST00000620949 238 ntBASIC17.8■□□□□ 0.44
CAPN1P07384 AP000550.4-202ENST00000639755 178 ntBASIC17.8■□□□□ 0.44
CAPN1P07384 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CAPN1P07384 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
CAPN1P07384 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CAPN1P07384 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN1P07384 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN1P07384 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CAPN1P07384 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 AL096828.2-201ENST00000567259 1965 ntBASIC17.79■□□□□ 0.44
CAPN1P07384 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.79■□□□□ 0.44
CAPN1P07384 AL163051.1-201ENST00000569214 1512 ntBASIC17.79■□□□□ 0.44
CAPN1P07384 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.79■□□□□ 0.44
CAPN1P07384 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 PCED1CP-201ENST00000419887 785 ntBASIC17.79■□□□□ 0.44
CAPN1P07384 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN1P07384 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.79■□□□□ 0.44
CAPN1P07384 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN1P07384 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.79■□□□□ 0.44
CAPN1P07384 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN1P07384 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN1P07384 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.79■□□□□ 0.44
CAPN1P07384 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN1P07384 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN1P07384 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 SDHAP2-201ENST00000455183 2001 ntBASIC17.78■□□□□ 0.44
CAPN1P07384 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 STARP1-201ENST00000397973 869 ntBASIC17.78■□□□□ 0.44
CAPN1P07384 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.78■□□□□ 0.44
CAPN1P07384 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.78■□□□□ 0.44
CAPN1P07384 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN1P07384 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CAPN1P07384 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.78■□□□□ 0.44
CAPN1P07384 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 PHGDH-209ENST00000641074 1780 ntBASIC17.78■□□□□ 0.44
CAPN1P07384 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CAPN1P07384 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.78■□□□□ 0.44
CAPN1P07384 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms