Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.44■□□□□ 0.54
MT-ND3P03897 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.44■□□□□ 0.54
MT-ND3P03897 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MT-ND3P03897 AC130371.2-201ENST00000619443 611 ntBASIC18.44■□□□□ 0.54
MT-ND3P03897 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND3P03897 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND3P03897 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
MT-ND3P03897 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.44■□□□□ 0.54
MT-ND3P03897 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
MT-ND3P03897 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
MT-ND3P03897 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
MT-ND3P03897 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.43■□□□□ 0.54
MT-ND3P03897 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
MT-ND3P03897 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
MT-ND3P03897 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 AP000692.2-201ENST00000608391 879 ntBASIC18.43■□□□□ 0.54
MT-ND3P03897 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.43■□□□□ 0.54
MT-ND3P03897 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
MT-ND3P03897 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
MT-ND3P03897 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
MT-ND3P03897 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-ND3P03897 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
MT-ND3P03897 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 MIR564-202ENST00000385049 94 ntBASIC18.42■□□□□ 0.54
MT-ND3P03897 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-ND3P03897 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 ATP5G1P1-201ENST00000448724 379 ntBASIC18.42■□□□□ 0.54
MT-ND3P03897 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.42■□□□□ 0.54
MT-ND3P03897 SLC25A1P4-201ENST00000567977 778 ntBASIC18.42■□□□□ 0.54
MT-ND3P03897 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.42■□□□□ 0.54
MT-ND3P03897 AC011298.2-201ENST00000617989 482 ntBASIC18.42■□□□□ 0.54
MT-ND3P03897 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 PHGDH-209ENST00000641074 1780 ntBASIC18.42■□□□□ 0.54
MT-ND3P03897 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
MT-ND3P03897 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.42■□□□□ 0.54
MT-ND3P03897 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.42■□□□□ 0.54
MT-ND3P03897 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
MT-ND3P03897 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.41■□□□□ 0.54
MT-ND3P03897 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
MT-ND3P03897 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
MT-ND3P03897 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
MT-ND3P03897 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms