Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.57■□□□□ 0.72
CHRNA1P02708 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CHRNA1P02708 RNA5SP415-201ENST00000517246 115 ntBASIC19.57■□□□□ 0.72
CHRNA1P02708 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.57■□□□□ 0.72
CHRNA1P02708 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 AC107918.4-202ENST00000641623 219 ntBASIC19.57■□□□□ 0.72
CHRNA1P02708 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHRNA1P02708 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHRNA1P02708 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRNA1P02708 CROCCP3-202ENST00000420820 1947 ntBASIC19.57■□□□□ 0.72
CHRNA1P02708 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA1P02708 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA1P02708 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA1P02708 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.56■□□□□ 0.72
CHRNA1P02708 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.56■□□□□ 0.72
CHRNA1P02708 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.56■□□□□ 0.72
CHRNA1P02708 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA1P02708 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
CHRNA1P02708 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA1P02708 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 PMPCAP1-201ENST00000508114 1576 ntBASIC19.56■□□□□ 0.72
CHRNA1P02708 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRNA1P02708 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 KRT8P47-201ENST00000604727 1398 ntBASIC19.56■□□□□ 0.72
CHRNA1P02708 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRNA1P02708 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRNA1P02708 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 AP002414.3-201ENST00000589352 1468 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 AC093010.1-201ENST00000473625 1624 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 BX842568.4-201ENST00000421222 227 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNA1P02708 BX005266.1-201ENST00000473402 457 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRNA1P02708 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CHRNA1P02708 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.55■□□□□ 0.72
CHRNA1P02708 AC105339.3-201ENST00000560043 636 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNA1P02708 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 AC140113.2-201ENST00000604370 208 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 AC027601.4-201ENST00000611259 610 ntBASIC19.55■□□□□ 0.72
CHRNA1P02708 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CHRNA1P02708 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CHRNA1P02708 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.55■□□□□ 0.72
CHRNA1P02708 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRNA1P02708 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CHRNA1P02708 AC079776.2-201ENST00000641154 1609 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNA1P02708 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNA1P02708 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNA1P02708 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHRNA1P02708 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNA1P02708 MIR1233-2-201ENST00000408138 82 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 MIR1233-1-201ENST00000408722 82 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRNA1P02708 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.54■□□□□ 0.72
CHRNA1P02708 AL356488.2-201ENST00000602755 427 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 Z83851.2-201ENST00000609564 659 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 AD001527.2-201ENST00000622994 785 ntBASIC19.54■□□□□ 0.72
CHRNA1P02708 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRNA1P02708 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRNA1P02708 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms