Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 SNORA78-201ENST00000459373 127 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 AC009065.1-201ENST00000564055 1225 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 AL023803.3-201ENST00000615559 522 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 CR769767.2-201ENST00000622735 460 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 LTB4R2-202ENST00000528054 3092 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 KRT8P7-201ENST00000533003 1432 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 HOXB1-202ENST00000577092 1414 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 SDHAP2-201ENST00000455183 2001 ntBASIC16.26■□□□□ 0.19
HLA-DQA2P01906 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQA2P01906 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 FLJ13224-201ENST00000313737 1514 ntBASIC16.25■□□□□ 0.19
HLA-DQA2P01906 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 GNAS-203ENST00000306120 1878 ntBASIC16.25■□□□□ 0.19
HLA-DQA2P01906 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 FITM1-202ENST00000559294 800 ntBASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 FLJ16779-201ENST00000612722 7638 ntBASIC16.25■□□□□ 0.19
HLA-DQA2P01906 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQA2P01906 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 AC112497.1-201ENST00000624824 639 ntBASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQA2P01906 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQA2P01906 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
HLA-DQA2P01906 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms