Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 PCED1CP-201ENST00000419887 785 ntBASIC19.43■□□□□ 0.7
HLA-DRAP01903 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DRAP01903 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DRAP01903 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 TSPY22P-201ENST00000427496 604 ntBASIC19.42■□□□□ 0.7
HLA-DRAP01903 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DRAP01903 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DRAP01903 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 AC009154.2-201ENST00000621177 724 ntBASIC19.41■□□□□ 0.7
HLA-DRAP01903 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-DRAP01903 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.41■□□□□ 0.7
HLA-DRAP01903 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 AC008764.6-201ENST00000595909 2069 ntBASIC19.4■□□□□ 0.7
HLA-DRAP01903 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HLA-DRAP01903 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.4■□□□□ 0.7
HLA-DRAP01903 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms