Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.68■□□□□ 0.26
NKX2-2O95096 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.68■□□□□ 0.26
NKX2-2O95096 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NKX2-2O95096 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.68■□□□□ 0.26
NKX2-2O95096 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX2-2O95096 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 AL353692.3-201ENST00000407031 1396 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.67■□□□□ 0.26
NKX2-2O95096 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NKX2-2O95096 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 TSPY12P-201ENST00000421279 868 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
NKX2-2O95096 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX2-2O95096 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX2-2O95096 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX2-2O95096 AC005332.3-201ENST00000589904 676 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 AL390719.2-201ENST00000606993 987 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.67■□□□□ 0.26
NKX2-2O95096 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 AC006116.8-202ENST00000587620 1550 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 GNAS-203ENST00000306120 1878 ntBASIC16.67■□□□□ 0.26
NKX2-2O95096 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NKX2-2O95096 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.67■□□□□ 0.26
NKX2-2O95096 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX2-2O95096 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.66■□□□□ 0.26
NKX2-2O95096 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NKX2-2O95096 AL049597.2-201ENST00000565575 961 ntBASIC16.66■□□□□ 0.26
NKX2-2O95096 RNF126P1-202ENST00000569893 925 ntBASIC16.66■□□□□ 0.26
NKX2-2O95096 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.66■□□□□ 0.26
NKX2-2O95096 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 AC134043.2-201ENST00000624206 2238 ntBASIC16.66■□□□□ 0.26
NKX2-2O95096 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX2-2O95096 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.66■□□□□ 0.26
NKX2-2O95096 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.66■□□□□ 0.26
NKX2-2O95096 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NKX2-2O95096 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NKX2-2O95096 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms