Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
PLOD3O60568 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.05■□□□□ 0.32
PLOD3O60568 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PLOD3O60568 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PLOD3O60568 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.04■□□□□ 0.32
PLOD3O60568 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 NOC2LP1-202ENST00000452600 2235 ntBASIC17.04■□□□□ 0.32
PLOD3O60568 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
PLOD3O60568 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PLOD3O60568 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 RNF152P1-201ENST00000397754 604 ntBASIC17.04■□□□□ 0.32
PLOD3O60568 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.04■□□□□ 0.32
PLOD3O60568 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.04■□□□□ 0.32
PLOD3O60568 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PLOD3O60568 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.04■□□□□ 0.32
PLOD3O60568 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PLOD3O60568 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PLOD3O60568 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PLOD3O60568 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 AL096828.2-201ENST00000567259 1965 ntBASIC17.03■□□□□ 0.32
PLOD3O60568 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 TSPY5P-201ENST00000426936 936 ntBASIC17.03■□□□□ 0.32
PLOD3O60568 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.03■□□□□ 0.32
PLOD3O60568 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 AC006011.2-201ENST00000621313 1158 ntBASIC17.03■□□□□ 0.32
PLOD3O60568 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
PLOD3O60568 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
PLOD3O60568 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PLOD3O60568 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PLOD3O60568 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PLOD3O60568 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.02■□□□□ 0.32
PLOD3O60568 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.02■□□□□ 0.32
PLOD3O60568 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PLOD3O60568 HOMER2P1-201ENST00000455653 964 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms