Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.05■□□□□ 0.32
URB1O60287 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
URB1O60287 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.05■□□□□ 0.32
URB1O60287 KRT18P2-201ENST00000447938 1258 ntBASIC17.05■□□□□ 0.32
URB1O60287 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
URB1O60287 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
URB1O60287 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.04■□□□□ 0.32
URB1O60287 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.04■□□□□ 0.32
URB1O60287 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.04■□□□□ 0.32
URB1O60287 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.04■□□□□ 0.32
URB1O60287 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.04■□□□□ 0.32
URB1O60287 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.04■□□□□ 0.32
URB1O60287 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.04■□□□□ 0.32
URB1O60287 NKAPP1-205ENST00000585790 367 ntBASIC17.04■□□□□ 0.32
URB1O60287 AC025062.2-201ENST00000605477 670 ntBASIC17.04■□□□□ 0.32
URB1O60287 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.04■□□□□ 0.32
URB1O60287 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.04■□□□□ 0.32
URB1O60287 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
URB1O60287 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.03■□□□□ 0.32
URB1O60287 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.03■□□□□ 0.32
URB1O60287 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 AC009947.1-201ENST00000444350 727 ntBASIC17.03■□□□□ 0.32
URB1O60287 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
URB1O60287 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.03■□□□□ 0.32
URB1O60287 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.03■□□□□ 0.32
URB1O60287 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 AL357033.4-201ENST00000617703 1807 ntBASIC17.03■□□□□ 0.32
URB1O60287 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.03■□□□□ 0.32
URB1O60287 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 LINC01521-201ENST00000504184 1943 ntBASIC17.03■□□□□ 0.32
URB1O60287 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
URB1O60287 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 AC113404.2-201ENST00000507884 177 ntBASIC17.03■□□□□ 0.32
URB1O60287 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
URB1O60287 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
URB1O60287 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
URB1O60287 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
URB1O60287 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms