Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 AL671277.2-201ENST00000458060 996 ntBASIC16.11■□□□□ 0.17
TRAF3IP2O43734 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP2O43734 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 SLC25A6P5-201ENST00000435663 894 ntBASIC16.1■□□□□ 0.17
TRAF3IP2O43734 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP2O43734 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.09■□□□□ 0.17
TRAF3IP2O43734 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 IGHGP-201ENST00000390555 1178 ntBASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ZNF444P1-201ENST00000559497 298 ntBASIC16.09■□□□□ 0.17
TRAF3IP2O43734 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 AC004263.2-201ENST00000617183 678 ntBASIC16.09■□□□□ 0.17
TRAF3IP2O43734 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 AL133373.2-201ENST00000623187 2828 ntBASIC16.09■□□□□ 0.17
TRAF3IP2O43734 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP2O43734 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms