Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.94■□□□□ 0.3
RRP8O43159 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.94■□□□□ 0.3
RRP8O43159 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.94■□□□□ 0.3
RRP8O43159 AP002472.1-201ENST00000577490 586 ntBASIC16.94■□□□□ 0.3
RRP8O43159 NKAPP1-205ENST00000585790 367 ntBASIC16.94■□□□□ 0.3
RRP8O43159 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.94■□□□□ 0.3
RRP8O43159 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RRP8O43159 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RRP8O43159 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RRP8O43159 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.94■□□□□ 0.3
RRP8O43159 BCL2-203ENST00000589955 5011 ntBASIC16.93■□□□□ 0.3
RRP8O43159 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 MIR770-201ENST00000390219 98 ntBASIC16.93■□□□□ 0.3
RRP8O43159 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.93■□□□□ 0.3
RRP8O43159 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.93■□□□□ 0.3
RRP8O43159 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.93■□□□□ 0.3
RRP8O43159 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RRP8O43159 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.93■□□□□ 0.3
RRP8O43159 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 AC125634.1-201ENST00000438758 1403 ntBASIC16.93■□□□□ 0.3
RRP8O43159 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
RRP8O43159 AC097374.2-201ENST00000618617 1306 ntBASIC16.93■□□□□ 0.3
RRP8O43159 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RRP8O43159 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.92■□□□□ 0.3
RRP8O43159 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RRP8O43159 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.92■□□□□ 0.3
RRP8O43159 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 AL357033.4-201ENST00000617703 1807 ntBASIC16.92■□□□□ 0.3
RRP8O43159 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.92■□□□□ 0.3
RRP8O43159 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RRP8O43159 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.92■□□□□ 0.3
RRP8O43159 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.92■□□□□ 0.3
RRP8O43159 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.92■□□□□ 0.3
RRP8O43159 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.92■□□□□ 0.3
RRP8O43159 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 MIR4469-201ENST00000583919 79 ntBASIC16.92■□□□□ 0.3
RRP8O43159 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RRP8O43159 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.92■□□□□ 0.3
RRP8O43159 AC068587.9-201ENST00000641814 219 ntBASIC16.92■□□□□ 0.3
RRP8O43159 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.92■□□□□ 0.3
RRP8O43159 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RRP8O43159 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.91■□□□□ 0.3
RRP8O43159 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RRP8O43159 AC098818.2-201ENST00000564925 2320 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms