Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TO15178 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TO15178 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TO15178 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.63■□□□□ 0.25
TO15178 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.63■□□□□ 0.25
TO15178 RN7SL606P-201ENST00000472779 293 ntBASIC16.63■□□□□ 0.25
TO15178 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.63■□□□□ 0.25
TO15178 GUSBP12-201ENST00000513727 720 ntBASIC16.63■□□□□ 0.25
TO15178 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TO15178 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
TO15178 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TO15178 AC016734.2-201ENST00000624325 1377 ntBASIC16.63■□□□□ 0.25
TO15178 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TO15178 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TO15178 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TO15178 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TO15178 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TO15178 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.62■□□□□ 0.25
TO15178 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 NEFHP1-201ENST00000412845 2629 ntBASIC16.62■□□□□ 0.25
TO15178 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 CHCHD2P8-201ENST00000429873 447 ntBASIC16.62■□□□□ 0.25
TO15178 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 AC068472.1-201ENST00000474589 881 ntBASIC16.62■□□□□ 0.25
TO15178 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.62■□□□□ 0.25
TO15178 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.62■□□□□ 0.25
TO15178 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TO15178 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.62■□□□□ 0.25
TO15178 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.62■□□□□ 0.25
TO15178 AC005332.8-201ENST00000622750 2735 ntBASIC16.62■□□□□ 0.25
TO15178 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.62■□□□□ 0.25
TO15178 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.62■□□□□ 0.25
TO15178 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TO15178 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TO15178 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.61■□□□□ 0.25
TO15178 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TO15178 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.61■□□□□ 0.25
TO15178 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
TO15178 SLC25A6P5-201ENST00000435663 894 ntBASIC16.61■□□□□ 0.25
TO15178 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.61■□□□□ 0.25
TO15178 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.61■□□□□ 0.25
TO15178 AL353801.3-201ENST00000609898 542 ntBASIC16.61■□□□□ 0.25
TO15178 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.61■□□□□ 0.25
TO15178 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TO15178 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.61■□□□□ 0.25
TO15178 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms