Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.47■□□□□ 0.23
NPIPA2E9PIF3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 LINC01711-201ENST00000598340 967 ntBASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 Z69720.1-201ENST00000601483 472 ntBASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 AC138894.3-201ENST00000603787 634 ntBASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 AL592071.1-201ENST00000611956 408 ntBASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 AC090164.3-201ENST00000610780 2143 ntBASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NPIPA2E9PIF3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.46■□□□□ 0.22
NPIPA2E9PIF3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 TSPY19P-201ENST00000418461 509 ntBASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 TSPY18P-201ENST00000441642 509 ntBASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 AC233702.3-201ENST00000578656 1387 ntBASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NPIPA2E9PIF3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 KRT89P-201ENST00000620027 1478 ntBASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AC009102.3-201ENST00000623118 1491 ntBASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 MIR149-201ENST00000384879 89 ntBASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 AC099336.1-202ENST00000602961 463 ntBASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NPIPA2E9PIF3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms