Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 TSPY12P-201ENST00000421279 868 ntBASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 AC112698.1-201ENST00000510299 916 ntBASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 KRT18P21-201ENST00000515767 1272 ntBASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TCRBV5S1A1TA0A578 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 Z83836.1-201ENST00000624605 1642 ntBASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.81■□□□□ 0.6
TCRBV5S1A1TA0A578 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 AL031133.1-201ENST00000406807 723 ntBASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 AL136038.3-201ENST00000561909 1096 ntBASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 AL355312.1-201ENST00000407115 2176 ntBASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 REXO1L11P-201ENST00000620964 1927 ntBASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 LINC00304-203ENST00000565008 1864 ntBASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TCRBV5S1A1TA0A578 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TCRBV5S1A1TA0A578 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms