Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 AL390719.2-201ENST00000606993 987 ntBASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 AC009154.2-201ENST00000621177 724 ntBASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC196A0A1B0GTZ2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.02■□□□□ 0.95
CCDC196A0A1B0GTZ2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC196A0A1B0GTZ2 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC196A0A1B0GTZ2 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC196A0A1B0GTZ2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC007613.1-201ENST00000572811 2597 ntBASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 TSPY12P-201ENST00000421279 868 ntBASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC087388.1-201ENST00000571370 1112 ntBASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC196A0A1B0GTZ2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 Z83836.1-201ENST00000624605 1642 ntBASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 RNF126P1-202ENST00000569893 925 ntBASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC196A0A1B0GTZ2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 KRT18P55-202ENST00000578578 1546 ntBASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC196A0A1B0GTZ2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms