Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ARFGEF1Q9Y6D6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 AC148477.5-201ENST00000625164 1645 ntBASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 AC023141.5-201ENST00000458585 616 ntBASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ARFGEF1Q9Y6D6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
ARFGEF1Q9Y6D6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.95■■□□□ 1.11
ARFGEF1Q9Y6D6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 AC004817.3-201ENST00000602957 2129 ntBASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 AC122714.2-201ENST00000502787 707 ntBASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 AC109322.1-201ENST00000524499 1264 ntBASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 AL589182.2-201ENST00000619332 1049 ntBASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ARFGEF1Q9Y6D6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 SPDYE21P-201ENST00000413323 827 ntBASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 AC096633.1-201ENST00000422446 749 ntBASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 KRT19P2-202ENST00000557173 1012 ntBASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 LINC00602-201ENST00000629776 2065 ntBASIC21.94■■□□□ 1.1
ARFGEF1Q9Y6D6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 AC004706.3-202ENST00000621574 984 ntBASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ARFGEF1Q9Y6D6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARFGEF1Q9Y6D6 PAWRP1-201ENST00000451083 565 ntBASIC21.92■■□□□ 1.1
ARFGEF1Q9Y6D6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ARFGEF1Q9Y6D6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.92■■□□□ 1.1
ARFGEF1Q9Y6D6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms