Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB3Q9Y5G1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 AC036111.1-201ENST00000533973 1582 ntBASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 AL356309.3-201ENST00000624132 1934 ntBASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 AC104076.2-201ENST00000448912 469 ntBASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 MIR4674-201ENST00000582457 87 ntBASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 AL031432.5-201ENST00000641059 760 ntBASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB3Q9Y5G1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 INGX-201ENST00000359239 846 ntBASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 CR769767.2-201ENST00000622735 460 ntBASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 KRT8P50-201ENST00000562022 1438 ntBASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PCDHGB3Q9Y5G1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 ARMC10P1-201ENST00000313754 855 ntBASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 KRT18P23-201ENST00000435622 1283 ntBASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 AC006011.2-201ENST00000621313 1158 ntBASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDHGB3Q9Y5G1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms