Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 DGCR10-201ENST00000609839 495 ntBASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.73■□□□□ 0.91
R3HCC1Q9Y3T6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC011506.1-201ENST00000474329 610 ntBASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 Z85996.1-201ENST00000494644 937 ntBASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AL355075.4-201ENST00000554988 638 ntBASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC130371.2-201ENST00000619443 611 ntBASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
R3HCC1Q9Y3T6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 SLC25A1P4-201ENST00000567977 778 ntBASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
R3HCC1Q9Y3T6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms