Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 AL031284.1-201ENST00000419297 478 ntBASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 AC098818.2-201ENST00000564925 2320 ntBASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
SYNPO2Q9UMS6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 PMPCAP1-201ENST00000508114 1576 ntBASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 AL356309.3-201ENST00000624132 1934 ntBASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 RNPS1P1-201ENST00000507437 918 ntBASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 AC116407.2-201ENST00000613639 860 ntBASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.73■□□□□ 0.91
SYNPO2Q9UMS6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.72■□□□□ 0.91
SYNPO2Q9UMS6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms