Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.99■□□□□ 0.31
CTSFQ9UBX1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 AC005336.2-201ENST00000593183 939 ntBASIC16.99■□□□□ 0.31
CTSFQ9UBX1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 AC132938.6-201ENST00000623828 1655 ntBASIC16.99■□□□□ 0.31
CTSFQ9UBX1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CTSFQ9UBX1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AC004408.2-201ENST00000623613 2777 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AC026396.1-201ENST00000419388 421 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 KRT18P65-201ENST00000439811 1286 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 MTCL1P1-201ENST00000446207 792 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AC096582.2-201ENST00000510860 516 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 BNIP3P18-201ENST00000593976 575 ntBASIC16.98■□□□□ 0.31
CTSFQ9UBX1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
CTSFQ9UBX1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 PHGDH-209ENST00000641074 1780 ntBASIC16.97■□□□□ 0.31
CTSFQ9UBX1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 AC004870.1-201ENST00000315132 882 ntBASIC16.97■□□□□ 0.31
CTSFQ9UBX1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 EMBP1-201ENST00000458200 901 ntBASIC16.97■□□□□ 0.31
CTSFQ9UBX1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 LINC01711-201ENST00000598340 967 ntBASIC16.97■□□□□ 0.31
CTSFQ9UBX1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CTSFQ9UBX1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CTSFQ9UBX1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms