Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 NUS1P2-201ENST00000417358 873 ntBASIC19.42■□□□□ 0.7
CNTN3Q9P232 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 AC135776.1-201ENST00000319817 2481 ntBASIC19.42■□□□□ 0.7
CNTN3Q9P232 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
CNTN3Q9P232 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNTN3Q9P232 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 AC096582.2-201ENST00000510860 516 ntBASIC19.41■□□□□ 0.7
CNTN3Q9P232 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 AC090164.3-201ENST00000610780 2143 ntBASIC19.41■□□□□ 0.7
CNTN3Q9P232 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.41■□□□□ 0.7
CNTN3Q9P232 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNTN3Q9P232 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AC004870.1-201ENST00000315132 882 ntBASIC19.4■□□□□ 0.7
CNTN3Q9P232 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AC009533.2-201ENST00000543664 586 ntBASIC19.4■□□□□ 0.7
CNTN3Q9P232 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 LETM1P2-201ENST00000597330 2178 ntBASIC19.4■□□□□ 0.7
CNTN3Q9P232 TP73-AS1-210ENST00000637775 1455 ntBASIC19.4■□□□□ 0.7
CNTN3Q9P232 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 AC026471.1-201ENST00000564629 3026 ntBASIC19.4■□□□□ 0.7
CNTN3Q9P232 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CNTN3Q9P232 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTN3Q9P232 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms