Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 AL109659.2-201ENST00000606809 1674 ntBASIC17.55■□□□□ 0.4
NDE1Q9NXR1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NDE1Q9NXR1 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 AC097658.1-201ENST00000475555 843 ntBASIC17.54■□□□□ 0.4
NDE1Q9NXR1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 AL050303.2-201ENST00000619798 666 ntBASIC17.54■□□□□ 0.4
NDE1Q9NXR1 AL391005.1-201ENST00000623953 2435 ntBASIC17.54■□□□□ 0.4
NDE1Q9NXR1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NDE1Q9NXR1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDE1Q9NXR1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.52■□□□□ 0.4
NDE1Q9NXR1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDE1Q9NXR1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 PCDH8P1-201ENST00000428983 2773 ntBASIC17.51■□□□□ 0.39
NDE1Q9NXR1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NDE1Q9NXR1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms