Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 RNF126P1-202ENST00000569893 925 ntBASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.5■□□□□ 0.39
CUEDC1Q9NWM3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 AL645929.1-201ENST00000420084 975 ntBASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 AC116407.4-201ENST00000623319 1061 ntBASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 AL390961.4-201ENST00000623958 2535 ntBASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CUEDC1Q9NWM3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 AC093010.1-201ENST00000473625 1624 ntBASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 AP003733.1-201ENST00000491725 852 ntBASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 AL136038.3-201ENST00000561909 1096 ntBASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.48■□□□□ 0.39
CUEDC1Q9NWM3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms