Protein–RNA interactions for Protein: Q9NVI7

ATAD3A, ATPase family AAA domain-containing protein 3A, humanhuman

Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3AQ9NVI7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 MIR3180-4-201ENST00000582223 153 ntBASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 AC010653.2-201ENST00000623505 997 ntBASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 TMEM191A-211ENST00000637163 1067 ntBASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 PHGDH-209ENST00000641074 1780 ntBASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATAD3AQ9NVI7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SIRPAP1-201ENST00000448467 1770 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 GNAS-203ENST00000306120 1878 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 MIR1238-201ENST00000408483 83 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 AC112497.1-201ENST00000624824 639 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 AL391005.1-201ENST00000623953 2435 ntBASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ATAD3AQ9NVI7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 AC007663.1-201ENST00000438948 1240 ntBASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.35■□□□□ 0.37
ATAD3AQ9NVI7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms