Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 AC073648.2-201ENST00000510116 352 ntBASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 AC021087.4-201ENST00000563761 564 ntBASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
FBXO28Q9NVF7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 MIR574-201ENST00000385209 96 ntBASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FBXO28Q9NVF7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC073592.3-201ENST00000625118 1834 ntBASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC007967.3-201ENST00000434308 558 ntBASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
FBXO28Q9NVF7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 AC093010.1-201ENST00000473625 1624 ntBASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 SCARNA2-201ENST00000458748 420 ntBASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
FBXO28Q9NVF7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms