Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PDLIM7Q9NR12 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 ESPNP-201ENST00000270691 2015 ntBASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 GMCL1P1-201ENST00000463439 1581 ntBASIC20.17■□□□□ 0.82
PDLIM7Q9NR12 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 AC004967.1-201ENST00000453589 447 ntBASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 AC112482.1-201ENST00000492080 688 ntBASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 AC008687.5-201ENST00000593746 558 ntBASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PDLIM7Q9NR12 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 RPS2P1-201ENST00000434010 821 ntBASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 KRT18P3-201ENST00000451602 1288 ntBASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 SART3-203ENST00000546611 1184 ntBASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.15■□□□□ 0.82
PDLIM7Q9NR12 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM7Q9NR12 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM7Q9NR12 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
PDLIM7Q9NR12 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM7Q9NR12 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PDLIM7Q9NR12 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 AC092910.1-201ENST00000482027 1129 ntBASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 Z83851.2-201ENST00000609564 659 ntBASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 AC079781.4-201ENST00000641908 219 ntBASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDLIM7Q9NR12 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms