Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC132008.2-207ENST00000454517 770 ntBASIC21.04■□□□□ 0.96
SH2D4AQ9H788 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SH2D4AQ9H788 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 MRPL3P1-201ENST00000400109 1033 ntBASIC21.03■□□□□ 0.96
SH2D4AQ9H788 RBM17P3-201ENST00000417687 1192 ntBASIC21.03■□□□□ 0.96
SH2D4AQ9H788 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 AC112698.1-201ENST00000510299 916 ntBASIC21.03■□□□□ 0.96
SH2D4AQ9H788 AC011467.2-201ENST00000598425 242 ntBASIC21.03■□□□□ 0.96
SH2D4AQ9H788 AC008608.2-201ENST00000606089 416 ntBASIC21.03■□□□□ 0.96
SH2D4AQ9H788 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SH2D4AQ9H788 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 AC005082.1-201ENST00000413042 2259 ntBASIC21.02■□□□□ 0.96
SH2D4AQ9H788 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.02■□□□□ 0.96
SH2D4AQ9H788 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SH2D4AQ9H788 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SH2D4AQ9H788 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
SH2D4AQ9H788 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.02■□□□□ 0.95
SH2D4AQ9H788 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.01■□□□□ 0.95
SH2D4AQ9H788 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 AC079776.4-201ENST00000511039 504 ntBASIC21.01■□□□□ 0.95
SH2D4AQ9H788 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 TP73-AS1-207ENST00000624167 988 ntBASIC21.01■□□□□ 0.95
SH2D4AQ9H788 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SH2D4AQ9H788 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms