Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
LIMD2Q9BT23 KRT8P32-201ENST00000512863 1461 ntBASIC10.81□□□□□ -0.68
LIMD2Q9BT23 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 RCC2P3-201ENST00000418112 1537 ntBASIC10.8□□□□□ -0.68
LIMD2Q9BT23 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 AP000593.1-201ENST00000393668 712 ntBASIC10.8□□□□□ -0.68
LIMD2Q9BT23 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 DHDH-203ENST00000522614 776 ntTSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 AC009065.1-201ENST00000564055 1225 ntBASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 MIR600HG-201ENST00000449175 5984 ntBASIC10.8□□□□□ -0.68
LIMD2Q9BT23 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LIMD2Q9BT23 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms