Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCM2Q9BSQ5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 TSPY12P-201ENST00000421279 868 ntBASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 BX276092.5-203ENST00000456199 560 ntBASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 AL121672.3-201ENST00000608644 468 ntBASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 AC132938.6-201ENST00000623828 1655 ntBASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.79■□□□□ 0.44
CCM2Q9BSQ5 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CCM2Q9BSQ5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 AC069148.1-201ENST00000608741 768 ntBASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
CCM2Q9BSQ5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCM2Q9BSQ5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms