Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.65■□□□□ 0.42
EBF4Q9BQW3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 AL138688.1-201ENST00000624851 1594 ntBASIC17.65■□□□□ 0.42
EBF4Q9BQW3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EBF4Q9BQW3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.64■□□□□ 0.42
EBF4Q9BQW3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EBF4Q9BQW3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
EBF4Q9BQW3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EBF4Q9BQW3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EBF4Q9BQW3 AC018695.7-201ENST00000624587 2492 ntBASIC17.64■□□□□ 0.42
EBF4Q9BQW3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 MIR6786-201ENST00000616843 113 ntBASIC17.64■□□□□ 0.41
EBF4Q9BQW3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 AL121761.2-201ENST00000598007 1648 ntBASIC17.64■□□□□ 0.41
EBF4Q9BQW3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EBF4Q9BQW3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 MESTP1-201ENST00000404287 994 ntBASIC17.63■□□□□ 0.41
EBF4Q9BQW3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 AC133963.1-201ENST00000504166 1679 ntBASIC17.63■□□□□ 0.41
EBF4Q9BQW3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EBF4Q9BQW3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EBF4Q9BQW3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
EBF4Q9BQW3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms