Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
PKP4Q99569 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.62■□□□□ 0.41
PKP4Q99569 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PKP4Q99569 AP000997.3-201ENST00000623333 2250 ntBASIC17.61■□□□□ 0.41
PKP4Q99569 AC026471.1-201ENST00000564629 3026 ntBASIC17.61■□□□□ 0.41
PKP4Q99569 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PKP4Q99569 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.61■□□□□ 0.41
PKP4Q99569 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 AC004263.2-201ENST00000617183 678 ntBASIC17.61■□□□□ 0.41
PKP4Q99569 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.61■□□□□ 0.41
PKP4Q99569 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 FLJ13224-201ENST00000313737 1514 ntBASIC17.61■□□□□ 0.41
PKP4Q99569 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.61■□□□□ 0.41
PKP4Q99569 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PKP4Q99569 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PKP4Q99569 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PKP4Q99569 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP4Q99569 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 IGHGP-201ENST00000390555 1178 ntBASIC17.6■□□□□ 0.41
PKP4Q99569 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PKP4Q99569 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.6■□□□□ 0.41
PKP4Q99569 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP4Q99569 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP4Q99569 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
PKP4Q99569 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
PKP4Q99569 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PKP4Q99569 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PKP4Q99569 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PKP4Q99569 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.59■□□□□ 0.41
PKP4Q99569 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 HTR7P1-202ENST00000624664 4411 ntBASIC17.59■□□□□ 0.41
PKP4Q99569 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PKP4Q99569 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms