Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AC112777.1-201ENST00000540175 1423 ntBASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AL357033.4-201ENST00000617703 1807 ntBASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CSMD1Q96PZ7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD1Q96PZ7 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD1Q96PZ7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.33■□□□□ 0.05
CSMD1Q96PZ7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CSMD1Q96PZ7 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 AC069262.1-201ENST00000539058 672 ntBASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 AC011467.2-201ENST00000598425 242 ntBASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 AC093214.1-201ENST00000511688 1107 ntBASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.33■□□□□ 0.04
CSMD1Q96PZ7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 AC023141.5-201ENST00000458585 616 ntBASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 MTDHP4-201ENST00000600287 670 ntBASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 AL513210.1-201ENST00000629608 234 ntBASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 GPR89P-201ENST00000407924 1495 ntBASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CSMD1Q96PZ7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 AC015911.4-201ENST00000588022 1070 ntBASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSMD1Q96PZ7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms