Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 AC051619.7-201ENST00000568314 623 ntBASIC17.64■□□□□ 0.41
CFAP54Q96N23 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 AC091812.2-201ENST00000619081 385 ntBASIC17.64■□□□□ 0.41
CFAP54Q96N23 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.64■□□□□ 0.41
CFAP54Q96N23 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CFAP54Q96N23 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 SPDYE22P-201ENST00000582158 798 ntBASIC17.63■□□□□ 0.41
CFAP54Q96N23 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 KRT19P2-202ENST00000557173 1012 ntBASIC17.63■□□□□ 0.41
CFAP54Q96N23 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 GABARAPL3-202ENST00000624044 1851 ntBASIC17.63■□□□□ 0.41
CFAP54Q96N23 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CFAP54Q96N23 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CFAP54Q96N23 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 AC105339.1-204ENST00000636249 355 ntBASIC17.62■□□□□ 0.41
CFAP54Q96N23 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.62■□□□□ 0.41
CFAP54Q96N23 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CFAP54Q96N23 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 RPS2P32-201ENST00000439199 892 ntBASIC17.61■□□□□ 0.41
CFAP54Q96N23 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CFAP54Q96N23 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
CFAP54Q96N23 TEX21P-204ENST00000641479 1693 ntBASIC17.61■□□□□ 0.41
CFAP54Q96N23 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms