Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 GUSBP12-201ENST00000513727 720 ntBASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 AP005901.3-202ENST00000581653 237 ntBASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRICKLE1Q96MT3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AL390961.4-201ENST00000623958 2535 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AP000867.3-201ENST00000524675 377 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AC018470.1-201ENST00000624790 3129 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AC132938.6-201ENST00000623828 1655 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AC233702.3-201ENST00000578656 1387 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 PHGDH-209ENST00000641074 1780 ntBASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRICKLE1Q96MT3 AL133373.2-201ENST00000623187 2828 ntBASIC18.64■□□□□ 0.58
PRICKLE1Q96MT3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRICKLE1Q96MT3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRICKLE1Q96MT3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.64■□□□□ 0.58
PRICKLE1Q96MT3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 TSPY12P-201ENST00000421279 868 ntBASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 MIR3652-201ENST00000579335 131 ntBASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRICKLE1Q96MT3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.63■□□□□ 0.57
PRICKLE1Q96MT3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms