Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 AC008894.3-201ENST00000624324 3103 ntBASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 Z85996.1-201ENST00000494644 937 ntBASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 AC120498.8-201ENST00000614275 531 ntBASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
MBD3L1Q8WWY6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 FLJ38576-201ENST00000623820 2459 ntBASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 AC133552.2-202ENST00000575694 574 ntBASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
MBD3L1Q8WWY6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 AC016769.1-201ENST00000409132 1010 ntBASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
MBD3L1Q8WWY6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms