Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 RCC2P3-201ENST00000418112 1537 ntBASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.27■□□□□ 0.03
RTN4IP1Q8WWV3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AL645608.8-201ENST00000606034 2086 ntBASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CA15P1-201ENST00000481698 905 ntBASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AL355075.4-201ENST00000554988 638 ntBASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
RTN4IP1Q8WWV3 AL096828.2-201ENST00000567259 1965 ntBASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 AP000525.1-201ENST00000608286 694 ntBASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 AC066615.1-201ENST00000640911 628 ntBASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RTN4IP1Q8WWV3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.24■□□□□ 0.03
RTN4IP1Q8WWV3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms