Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RPS4Y2Q8TD47 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 AC012618.2-201ENST00000428058 849 ntBASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 AC097488.1-201ENST00000507834 756 ntBASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 AC104390.1-201ENST00000555663 520 ntBASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RPS4Y2Q8TD47 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RPS4Y2Q8TD47 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 AL023803.3-201ENST00000615559 522 ntBASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 CR769767.2-201ENST00000622735 460 ntBASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 AC100803.2-201ENST00000562459 1963 ntBASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RPS4Y2Q8TD47 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.82■□□□□ 0.12
RPS4Y2Q8TD47 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms