Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 LINC00602-201ENST00000629776 2065 ntBASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 AC008687.5-201ENST00000593746 558 ntBASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 AC024563.2-201ENST00000603282 481 ntBASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDH19Q8TAB3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 AC113404.2-201ENST00000507884 177 ntBASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDH19Q8TAB3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 AC012317.2-201ENST00000623305 2251 ntBASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 KRT89P-201ENST00000620027 1478 ntBASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 AC092647.4-201ENST00000457211 535 ntBASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PCDH19Q8TAB3 LETM1P2-201ENST00000597330 2178 ntBASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 AC100803.2-201ENST00000562459 1963 ntBASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH19Q8TAB3 FAM8A6P-201ENST00000407496 1135 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms