Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 CRYGFP-201ENST00000418459 633 ntBASIC17.71■□□□□ 0.43
CPSF7Q8N684 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 AC097488.1-201ENST00000507834 756 ntBASIC17.71■□□□□ 0.43
CPSF7Q8N684 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CPSF7Q8N684 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPSF7Q8N684 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPSF7Q8N684 KRT18P22-201ENST00000402024 1347 ntBASIC17.71■□□□□ 0.42
CPSF7Q8N684 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CPSF7Q8N684 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
CPSF7Q8N684 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.71■□□□□ 0.42
CPSF7Q8N684 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 AC005521.1-201ENST00000393351 872 ntBASIC17.7■□□□□ 0.42
CPSF7Q8N684 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 CKBP1-201ENST00000565489 1086 ntBASIC17.7■□□□□ 0.42
CPSF7Q8N684 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 AC011298.2-201ENST00000617989 482 ntBASIC17.7■□□□□ 0.42
CPSF7Q8N684 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.7■□□□□ 0.42
CPSF7Q8N684 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPSF7Q8N684 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 AC113347.1-201ENST00000413321 391 ntBASIC17.69■□□□□ 0.42
CPSF7Q8N684 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 SLC25A1P4-201ENST00000567977 778 ntBASIC17.69■□□□□ 0.42
CPSF7Q8N684 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 AC130371.2-201ENST00000619443 611 ntBASIC17.69■□□□□ 0.42
CPSF7Q8N684 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPSF7Q8N684 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPSF7Q8N684 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPSF7Q8N684 AC004951.3-201ENST00000418645 1148 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms