Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB42Q8N4Z0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAB42Q8N4Z0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.62■□□□□ 0.41
RAB42Q8N4Z0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAB42Q8N4Z0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.62■□□□□ 0.41
RAB42Q8N4Z0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 IGHGP-201ENST00000390555 1178 ntBASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 AC104581.1-202ENST00000635932 2618 ntBASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 PHGDH-209ENST00000641074 1780 ntBASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 AC093677.2-201ENST00000600169 1863 ntBASIC17.61■□□□□ 0.41
RAB42Q8N4Z0 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 AC005332.3-201ENST00000589904 676 ntBASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 AC091076.1-201ENST00000610741 619 ntBASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.6■□□□□ 0.41
RAB42Q8N4Z0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 AC135776.1-201ENST00000319817 2481 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 IER3-202ENST00000376377 1350 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 AC005332.1-201ENST00000577698 1310 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 AC022898.2-201ENST00000616822 1312 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 PCED1CP-201ENST00000419887 785 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 FAM86EP-206ENST00000510506 987 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 AC011498.5-201ENST00000592027 486 ntBASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RAB42Q8N4Z0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms