Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 MIR5100-201ENST00000579544 119 ntBASIC18.41■□□□□ 0.54
CHPFQ8IZ52 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHPFQ8IZ52 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 AC114341.1-201ENST00000618070 349 ntBASIC18.4■□□□□ 0.54
CHPFQ8IZ52 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHPFQ8IZ52 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHPFQ8IZ52 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHPFQ8IZ52 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHPFQ8IZ52 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
CHPFQ8IZ52 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 LINC00602-201ENST00000629776 2065 ntBASIC18.39■□□□□ 0.53
CHPFQ8IZ52 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 AC068472.1-201ENST00000474589 881 ntBASIC18.39■□□□□ 0.53
CHPFQ8IZ52 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 AC064862.7-201ENST00000604520 867 ntBASIC18.39■□□□□ 0.53
CHPFQ8IZ52 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHPFQ8IZ52 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 AC009154.2-201ENST00000621177 724 ntBASIC18.38■□□□□ 0.53
CHPFQ8IZ52 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHPFQ8IZ52 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms