Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZC3H3Q8IXZ2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
ZC3H3Q8IXZ2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 AP003733.1-201ENST00000491725 852 ntBASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 AL390719.2-201ENST00000606993 987 ntBASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 LINC00304-203ENST00000565008 1864 ntBASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.6■□□□□ 0.73
ZC3H3Q8IXZ2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 DDX43P3-201ENST00000441064 443 ntBASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 GPR32P1-201ENST00000601788 811 ntBASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 AC009949.1-201ENST00000623048 1830 ntBASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 AC133963.1-201ENST00000504166 1679 ntBASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
ZC3H3Q8IXZ2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 AL353692.3-201ENST00000407031 1396 ntBASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.58■□□□□ 0.73
ZC3H3Q8IXZ2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms