Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 GCSHP5-201ENST00000443090 522 ntBASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 AL158047.1-201ENST00000445918 881 ntBASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 RN7SL471P-201ENST00000580476 299 ntBASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 CROCCP1-201ENST00000426910 5675 ntBASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRIM42Q8IWZ5 KRT8P50-201ENST00000562022 1438 ntBASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 AC046158.3-201ENST00000624947 2558 ntBASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 AC080080.1-201ENST00000625121 2420 ntBASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM42Q8IWZ5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 AC093010.1-201ENST00000473625 1624 ntBASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 PP12613-201ENST00000424958 2230 ntBASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 NIFKP9-201ENST00000419265 221 ntBASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 C1QBPP2-201ENST00000528754 825 ntBASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM42Q8IWZ5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM42Q8IWZ5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms